If your kitchen has been missing that warm apple and cinnamon smell lately, this apple crumble muffins recipe is exactly what you need.
Every bite gives you a soft, spiced muffin studded with fresh apple chunks, finished off with a buttery, crunchy crumble topping.
This recipe walks you through every step, from mixing the batter to getting that golden crumble just right on top.
It comes together in under 40 minutes, which makes it an easy weekend bake or a make-ahead breakfast for busy mornings.
If you love a good crumb topping as much as I do, you’ll want to try my Pumpkin Spice Crumble Muffins next.
It has that same cozy, streusel-topped charm but with a pumpkin twist for fall.
| Quick Recipe Summary | |
|---|---|
| Prep Time | 15 minutes |
| Cook Time | 22 minutes |
| Total Time | 37 minutes |
| Servings | 12 muffins |
| Difficulty Level | Easy |

Why You’ll Love This Apple Crumble Muffins Recipe
These muffins give you all the cozy flavor of a classic apple crumble, but in a portable, grab-and-go form.
The soft, cinnamon-spiced crumb pairs perfectly with the crunchy, buttery topping.
They’re simple enough for a beginner baker but taste like something from a bakery case.
Here’s what makes them worth adding to your regular rotation.
- Made with pantry staples you likely already have on hand
- Soft, moist muffin base with real chunks of apple in every bite
- A crunchy, buttery crumble topping that bakes up golden and crisp
- Freezer friendly, so you can make a double batch and save some for later
- Ready in under 40 minutes from start to finish
You might also enjoy: Apple Crumble Cheesecake
Ingredients
You only need a handful of basic ingredients for both the muffin batter and the crumble topping.
Nothing here is hard to find, and most of it is likely already in your pantry.
- For the muffins: all-purpose flour, baking powder, baking soda, ground cinnamon, ground nutmeg, salt, granulated sugar, light brown sugar, unsalted butter (melted), large eggs, whole milk, sour cream, vanilla extract, and diced apples (Granny Smith or Honeycrisp work well)
- For the crumble topping: all-purpose flour, brown sugar, ground cinnamon, a pinch of salt, cold unsalted butter, and optional old-fashioned rolled oats for extra crunch
This same crumb topping technique is one I use often, including in my Cranberry Crumble Bars, since a cold-butter crumble always bakes up with the best texture.
Kitchen Equipment Needed
You don’t need any special equipment to make these muffins, just a few basics that make the process quicker and mess free.
A couple of these tools genuinely make a difference in how evenly the muffins bake and how neatly they come out of the pan.
- Standard 12-cup muffin pan
- Silicone muffin liners or paper liners
- Large and medium mixing bowls
- Whisk and rubber spatula
- Hand mixer (optional, for creaming the butter and sugar)
- Cookie scoop or ice cream scoop for even portioning
- Wire cooling rack
Read Also: Apple Crumble Pie Recipe
Recommended Products for This Recipe
These are a few products I personally use and recommend whenever I bake a batch of muffins.
None of them are required, but they each solve a small pain point that makes this recipe easier and more consistent.
1. USA Pan Nonstick Muffin Pan
This pan has a heavy-gauge, corrugated surface that promotes even airflow and browning, so every muffin bakes up the same golden color.
The nonstick coating also means the crumble topping never sticks to the pan, even when it bubbles over slightly.
2. KitchenAid Cordless Hand Mixer
Creaming the butter and sugar smooth makes a real difference in how tender the muffins turn out.
A cordless hand mixer is easy to maneuver around the bowl and cuts the mixing time down significantly compared to doing it by hand.
3. OXO Good Grips Medium Cookie Scoop
This scoop portions the batter evenly into every muffin cup, so you get muffins that bake at the same rate and rise to the same height.
It also keeps the process a lot less messy than spooning batter by hand.
4. Checkered Chef Stainless Steel Cooling Rack
Letting muffins cool on a wire rack keeps the bottoms from getting soggy, since air can circulate underneath them.
This one is sturdy enough to hold a full batch and fits neatly inside a sheet pan for easy storage.
These tools pair nicely with the ones I recommend in my Cranberry Apple Crumb Pie Recipe, since a lot of the same equipment carries over between muffins and pies.

Step-by-Step Instructions: How to Make Apple Crumble Muffins
Follow these steps closely and you’ll have a batch of bakery-style apple crumble muffins ready in well under an hour.
Each step is broken down so even a first-time baker can follow along without guessing.
1. Prep the apples and preheat the oven
- Preheat your oven to 375°F (190°C) and line a 12-cup muffin pan with paper or silicone liners.
- Peel, core, and dice your apples into small, roughly quarter-inch pieces. Smaller pieces distribute more evenly through the batter and bake through completely.
- Set the diced apples aside while you prepare the crumble topping and batter.
2. Make the crumble topping
- In a small bowl, whisk together the flour, brown sugar, cinnamon, and a pinch of salt.
- Add the cold, cubed butter and use your fingers or a pastry cutter to work it into the dry ingredients until the mixture looks like coarse, clumpy sand.
- If using oats, stir them in at the end so they stay whole and add extra texture.
- Place the crumble mixture in the refrigerator while you make the muffin batter, so the butter stays cold and holds its shape in the oven.
3. Mix the dry ingredients
- In a large mixing bowl, whisk together the flour, baking powder, baking soda, cinnamon, nutmeg, and salt.
- Set this bowl aside once everything is evenly combined.
4. Mix the wet ingredients and combine the batter
- In a separate bowl, beat the melted butter with the granulated sugar and brown sugar until smooth.
- Add the eggs one at a time, beating well after each addition, then mix in the milk, sour cream, and vanilla extract.
- Pour the wet ingredients into the bowl of dry ingredients and gently fold together with a spatula until just combined. A few small flour streaks are fine, and overmixing will make the muffins tough.
- Fold in the diced apples last, distributing them evenly throughout the batter.
5. Fill the muffin cups and add the crumble
- Using a cookie scoop, divide the batter evenly among the 12 muffin cups, filling each about three-quarters full.
- Remove the crumble topping from the fridge and sprinkle a generous amount over each muffin, gently pressing it down so it sticks to the batter.
6. Bake and cool
- Bake for 20 to 22 minutes, or until a toothpick inserted into the center of a muffin comes out clean and the crumble topping is golden brown.
- Let the muffins cool in the pan for 5 minutes, then transfer them to a wire cooling rack to cool completely, or enjoy them warm.
You might also enjoy: Blueberry Breakfast Muffins
Tips for The Best Apple Crumble Muffins
A few small details make the difference between good muffins and great ones.
Keep these tips in mind as you bake.
- Use a firmer, tart apple like Granny Smith or Honeycrisp so the pieces hold their shape instead of turning mushy
- Keep the crumble topping butter cold right up until it goes on the muffins for the crispest texture
- Don’t overmix the batter once the wet and dry ingredients are combined, or the muffins will turn dense
- Fill the muffin cups generously for that classic bakery-style domed top
- Let the muffins cool for a few minutes in the pan before moving them, so the crumble topping has time to set
I learned a lot of these same tricks while developing my Lemon Poppy Seed Muffins, since keeping the batter from overmixing matters just as much there.
Serving Suggestions

These muffins are flexible enough to serve at almost any time of day. Here are a few of my favorite ways to enjoy them.
- Warm from the oven with a pat of butter melting on top
- Alongside a hot cup of coffee or spiced chai for breakfast
- As part of a brunch spread next to Strawberry Muffins for a variety of flavors
- Dusted with a little extra cinnamon sugar for a sweeter finish
- Packed in a lunchbox or bag for an easy on-the-go snack
Variations of Apple Crumble Muffins
Once you’ve made the recipe as written, it’s easy to switch things up depending on what you’re craving or what’s in your fridge.
Here are a few variations worth trying.
- Add half a cup of chopped walnuts or pecans to the batter for extra crunch
- Swap half the apples for pears for a softer, milder flavor
- Stir a tablespoon of maple syrup into the batter for a deeper, caramel-like sweetness
- Add a simple vanilla glaze drizzle over the cooled muffins for an extra-sweet treat
- Use a mix of two apple varieties for more complex flavor and texture
If you like combining fruits in your baking, my Blueberry Peach Muffins follow a similar approach.
Storage and Reheating
These muffins store well, which makes them a great make-ahead option for the week. Here’s how to keep them fresh.
- Store cooled muffins in an airtight container at room temperature for up to 3 days
- Refrigerate for up to a week if you’d like them to last longer
- Freeze in a single layer, then transfer to a freezer bag for up to 3 months
- Reheat in the microwave for 15 to 20 seconds, or in a 300°F oven for about 8 minutes if frozen
Another favorite: Peach Muffins With Streusel Topping
Nutritional Facts
Nutrition will vary slightly depending on the exact apples and ingredients you use, but here’s a general estimate per muffin.
- Calories: approximately 230
- Carbohydrates: 33g
- Protein: 3g
- Fat: 9g
- Saturated Fat: 5g
- Cholesterol: 40mg
- Sodium: 150mg
- Fiber: 1g
- Sugar: 18g
My Chocolate Chip Banana Muffins run in a similar nutritional range if you’re comparing options for a breakfast rotation.
Health Benefits of Key Ingredients
While these are certainly a treat, a few of the ingredients bring some genuine nutritional value along for the ride.
Here’s a quick look.
- Apples provide fiber and vitamin C, along with natural sweetness that helps cut back on added sugar
- Cinnamon has antioxidant properties and has been linked to helping regulate blood sugar
- Eggs add protein and help give the muffins structure and richness
- Sour cream contributes calcium and healthy fats while keeping the crumb moist
- Nutmeg contains trace minerals and adds warmth without needing extra sugar
Read Also: Mini Carrot Cake Muffins
FAQs About Apple Crumble Muffins
1. Can I use a different type of apple?
Yes, any baking apple works well here. Granny Smith and Honeycrisp hold their shape best, but Braeburn or Fuji apples are also good choices.
2. Why did my crumble topping melt into the muffins instead of staying crumbly?
This usually happens when the butter in the crumble topping gets too warm before baking.
Keep the topping refrigerated until the moment you’re ready to sprinkle it on the muffins.
3. Can I make these muffins ahead of time?
Absolutely, these muffins actually taste great the next day.
Store them in an airtight container and they’ll stay fresh for up to 3 days at room temperature.
4. Can I make this recipe gluten free?
Yes, a 1:1 gluten-free all-purpose flour blend works well as a substitute in both the batter and the crumble topping.
The texture may be very slightly denser, but the flavor stays the same.
5. Do I need to peel the apples?
Peeling is recommended for the softest texture throughout the muffin.
If you prefer more texture or want to save time, you can leave the peel on as long as the apples are diced small.
I get a version of these same questions often on my Cinnamon Apple Cake Recipe, since the ingredients and troubleshooting overlap quite a bit.

Apple Crumble Muffins
Ingredients
- 1½ cups all-purpose flour 190g
- 1 teaspoon baking powder
- ½ teaspoon baking soda
- 2 teaspoons ground cinnamon
- ¼ teaspoon ground nutmeg
- ½ teaspoon salt
- ½ cup granulated sugar 100g
- â…“ cup light brown sugar 67g, packed
- ½ cup unsalted butter 113g, melted
- 2 large eggs at room temperature
- ¼ cup whole milk 60ml
- ¼ cup sour cream 60g
- 1 teaspoon vanilla extract
- 2 cups apples about 2 medium, Granny Smith or Honeycrisp, peeled, cored, and diced into ¼-inch pieces
- â…“ cup all-purpose flour 42g
- â…“ cup brown sugar 67g, packed
- 1 teaspoon ground cinnamon
- 1 pinch salt
- 3 tablespoons unsalted butter 42g, cold and cubed
- ¼ cup old-fashioned rolled oats optional, for extra crunch
Equipment
- Standard 12-cup muffin pan
- Silicone muffin liners or paper liners
- Large mixing bowl
- Medium mixing bowl
- Whisk
- Rubber spatula
- Hand mixer optional, for creaming butter and sugar
- Cookie scoop or ice cream scoop, optional
- Wire cooling rack
Method
- Preheat the oven to 375°F (190°C) and line a 12-cup muffin pan with liners. Peel, core, and dice the apples into ¼-inch pieces.
- In a small bowl, whisk together the flour, brown sugar, cinnamon, and salt. Work in the cold butter with your fingers until the mixture is coarse and clumpy. Stir in the oats if using, and refrigerate the topping.
- In a large bowl, whisk together the flour, baking powder, baking soda, cinnamon, nutmeg, and salt until evenly combined.
- In a separate bowl, beat the melted butter with the granulated and brown sugars until smooth. Beat in the eggs one at a time, then mix in the milk, sour cream, and vanilla. Pour the wet ingredients into the dry and fold gently with a spatula until just combined. Fold in the diced apples.
- Divide the batter evenly among the 12 muffin cups, filling each about three-quarters full. Sprinkle a generous amount of the chilled crumble topping over each muffin and gently press it down.
- Bake for 20 to 22 minutes, until a toothpick comes out clean and the topping is golden. Let cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.
Nutrition
Notes
- Use a firmer, tart apple like Granny Smith or Honeycrisp so the pieces hold their shape instead of turning mushy.
- Keep the crumble topping butter cold right up until it goes on the muffins for the crispest texture.
- Don’t overmix the batter once the wet and dry ingredients are combined, or the muffins will turn dense.
- Fill the muffin cups generously for that classic bakery-style domed top.
- Let the muffins cool for a few minutes in the pan before moving them, so the crumble topping has time to set.
- Add half a cup of chopped walnuts or pecans to the batter for extra crunch.
- Swap half the apples for pears for a softer, milder flavor.
- Store cooled muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- Freeze in a single layer, then transfer to a freezer bag for up to 3 months.
- Reheat in the microwave for 15 to 20 seconds, or in a 300°F oven for about 8 minutes if frozen.
Private Notes
Tried this recipe?
Let us know how it was!Conclusion
These apple crumble muffins bring together everything cozy about fall baking in one easy, handheld recipe.
The soft, spiced crumb and buttery topping make them just as good for breakfast as they are for dessert.
Give this recipe a try this weekend, and let me know in the comments how yours turned out.
If you loved them, share this post with a friend who needs a new fall baking recipe in their life.
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